Peiwu Qin

Assistant Professor

2021-10-11

EDUCATION

2008.6 – 2013.8, Ph.D student at Department of Biochemistry, University of Missouri, Columbia, USA. Received a Ph.D. degree in December 2013. Thesis title: Single molecule biophysics study of ribosome dynamics.

2010.9 – 2013.8, MA student at Department of Statistics, University of Missouri, Columbia, USA. Received a MA degree in December 2013. Thesis title: Statistical image analysis of photoactivated localization microscopy.

006.8 – 2008.5, MSc student at Department of Chemistry, Northeastern University, USA. Received a MSc. degree in May 2008.

2002.9 – 2005.7, MSc student at Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, China. Received a MSc. degree in July 2005. Thesis title: Cloning and functional characterization of maternal factor for Zebrafish embryo development.

1998.9 – 2002.7, undergraduate student at Department of Biotechnology, Northeastern Agricultural University, Harbin, China. Received a BSc degree in July 1998,

PROFESSIONAL EXPERIENCE

2018.9 - present, assistant professor at Tsinghua-Berkeley Shenzhen Institute, Tsinghua University, Shenzhen, China

2013.8-2018.9, postdoctoral scholar at University of California, Berkeley, Department of Physics, California, USA.

2005.8-2006.8, Research Assistant at Institute of Zoology, Chinese Academy of Sciences, China.

TEACHING

2006-2008: Undergraduate course: General Chemistry Lab

RESEARCH INTERESTS

1.Chromosome organization and its role in gene expression and cell lineage determination with advanced fluorescent microscopy.

2. Molecular, cellular and functional studies of brain meninges

3. Biomedical image processing with statistical and machine learning approaches

4. Biomedical experiments in virtual reality

5. Virus RNA detection on microfluidic chip

6. Imaging guided surgical robot

RECENT PUBLICATIONS

1. Chuhui Wang*, Peiwu Qin*, Donghong Lv, Jiachen Wan, Shuqing Sun, Hui Ma. Characterization of anisotropy of the porous anodic alumina by the Mueller matrix imaging method. 28(5): 6740-6754 (2020).

2. Qian He*, Dongmei Yu*, Mengdi Bao, Grant Korensky, Juhong Chen, Mingyeong, Juwon Kim, Myeongkee Park, Peiwu Qin†, Ke Du†. High-throughput and all-solution phase African Swine Fever Virus (ASFV) detection using CRISP-Cas12a and fluorescence based point-of-care system. Biosensors and Bioelectronics, 154(112068):1-8 (2020).

3. Xinye Chen, Abbi Miller, Shengting Cao, Jie Zhang, Qian He, Ruo-Qian Wang, Xin Yong, Peiwu Qin, Blanca H. Lapizco-Encinas, Ke Du. Rapid Escherichia Coli trapping and retrieval from bodily fluids via a three-dimensional bead-stacked nanodevice, ACS Appl. Mater. Interfaces, 12:7888-7806 (2020).

4. Qian He*, Dongmei Yu*, Mengdi Bao, Grant Korensky, Juhong Chen, Mingyeong, Juwon Kim, Myeongkee Park, Peiwu Qin†, Ke Du†. High-throughput and all-solution phase African Swine Fever Virus (ASFV) detection using CRISP-Cas12a and fluorescence based point-of-care system. BioRxiv, 2019.

5. Xinye Chen, Abbi miller, Shengting Cao, Yu Gan, Jie Zhang, Qian He, Ruo-Qian Wang, Xin Yong, Peiwu Qin, Blanca Lapizco-Encinas, Ke Du. Efficient Escherichia coli (E. Coli) Trapping and Retrieval from Bodily Fluids via a Three-Dimensional (3D) Microbeads Stacked Nano-Device.  ChemRxiv, 2019.

6. Qian He, Mengdi Bao, Kenneth Hass, Wenxia Lin, Peiwu Qin†, Ke Du†. Perspective of molecular diagnosis in healthcare: from barcode to pattern recognition. Diagnostics 9(3), 75:1-8 (2019).

7. Peiwu Qin*, Myeongkee Park*, Kendra Alfson, Manasi Tamhankar, Ricardo Carrion, Jean Patterson, Anthony Griffiths, Qian He, Ahmet Yildiz†, Richard Matheis†, Ke Du†. Rapid and fully microfluidic Ebola Virus Detection with CRISPR-Cas13a. ACS sensor, 4, 1048-1054(2019).

8. Yongbing Zhang, Lixin Chen, Chenggang Yan, Peiwu Qin, Xiangyang Ji, Qionghao Dai. Weighted Convolutional Motion-Compensated Frame Rate Up-Conversion Using Deep Residual Network. IEEE Transactions on Circuits and Systems for Video Technology, pp.1-1.10.1109/TCSVT.2018.2885564.

9. Peiwu Qin*, Mahmut Parlak*, Mazhar Adli, Ahmet Yildiz. Multiplex labeling of chromosome with CRISPR/dCas9.Nature Communications, 14725:1-8 (2017).

10. Jigar N. Bandaria,Peiwu Qin, Veysel Berk, Steven Chu, Ahmet Yildiz. Shelterin protects chromosome termini by compacting telomeric DNA.Cell, 164(3):735-746 (2016).

11. Dongmei Yu,Peiwu Qin, Peter Cornish. Single molecule RNA-RNA interaction.Methods in Molecule Biology, Book Chapter, 2014, Spinger.

12. Peiwu Qin, Dongmei Yu, Xiaobing Zuo, Peter V. Cornish. Structured mRNA induces the ribosome into a novel supe rotated state.EMBO Report,12(2):185-190 (2014).

13. Jianhua Lv, Tie Yang, Haixia Yang, Zhiwei Li,Peiwu Qin, Xiling Zhang, Xiaoliang Liang, Jiayin Li, Quan Chen. Identification of myb genes in Euplotes adediculatus may indicate an early evolutionary process.Gene, 530(2): 266-72 (2013).

14. Dongmei Yu, Chao Zhang, Han Wang,Peiwu Qin†. Characterization of the weak calcium binding of trimeric globular adiponectin.Cell Biochemistry and Function,31(4):338-343 (2013).

15. Peiwu Qin, Chao Zhang, Han Wang, Dongmei YU, Peter V. Cornish, and Dong Xu. RNA-protein distance pattern reveal the mechanism of translational attenuation.Chinese life Sciences,57(11):1131-1139 (2014).

16. Sarma V.S. Akella, Asokan Anbanandam, Allek Kelm, Ritcha Mehra-Chaudhary, Yirui Wei,Peiwu Qin, Yingying Lee, Mark V. Berjanskii, Jacob A. Mick, Lesa Jean Beamer, and Steven R. Van Doren. Solution NMR of 1 463-residue phosphohexomutase: domain 4 motility, substrates, and Phosphoryl transfer defect.Biochemistry, 51(3):807-819 (2012).

*co-first author,†Corresponding author